Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

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Displaying 1 to 82 (from 82) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 1.7316339
 2  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 3  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 1.3575221
 4  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 1.190584
 5  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 1.190584
 6  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:02  Panama 1.1400462
 7  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 8  A*31:01-B*40:02-C*15:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 9  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 10  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 11  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 12  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 13  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 14  A*24:17-B*40:02-C*01:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 15  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 16  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.8658339
 17  B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 18  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.82111,463
 19  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 20  A*02:01:01-B*40:02:01-C*03:02:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 21  A*24:02:01-B*40:02:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 22  A*68:01:01-B*40:02:01-C*03:02:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 23  A*68:03:01-B*40:02:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 24  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.6787221
 25  A*24:02-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 26  A*31:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 27  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 28  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 29  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.4545330
 30  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 31  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:01  Panama 0.3800462
 32  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*14:01  Panama 0.3800462
 33  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP Black South or Central American 0.30624,889
 34  A*24:02-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.3030330
 35  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.3030330
 36  A*24:14-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.30251,463
 37  A*02:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 38  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 39  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 40  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 41  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 42  A*68:05-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 43  A*68:05-B*40:02-C*15:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 44  A*68:01:02-B*40:02:01-C*03:04:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.2262221
 45  A*02:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 46  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 47  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 48  A*31:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 49  A*68:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 50  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 51  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 52  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP Caribean Indian 0.190414,339
 53  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*105:01  Panama 0.1900462
 54  A*68:01-B*40:02-C*12:02-DRB1*04:07-DQB1*03:02-DPB1*02:01  Panama 0.1900462
 55  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.18301,999
 56  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.17991,463
 57  A*26:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.1515330
 58  A*31:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.1515330
 59  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.14915,926
 60  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 61  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 62  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 63  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.13891,463
 64  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA NMDP Black South or Central American 0.10984,889
 65  A*02:22-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.10611,463
 66  A*02:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09801,999
 67  A*24:22-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 68  A*24:02-B*40:02-C*01:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.06901,463
 69  A*31:01-B*40:02-C*01:10-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.06841,463
 70  A*02:05-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 71  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 72  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA African American pop 4 0.04402,411
 73  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA African American pop 4 0.04402,411
 74  A*02:22-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03441,463
 75  A*02:11-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 76  A*02:13-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 77  A*02:22-B*40:02-C*04:01-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 78  A*30:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 79  A*68:01-B*40:02-C*14:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 80  A*29:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03321,463
 81  A*26:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 82  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.02301,999

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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